Publication (^: equal contribution, *: corresponding author)
- Boya Wang^*, Siyuan S. Wang^, Cameron Chalk, Andrew D. Ellington, David Soloveichik*. Parallel molecular computation on digital data stored in DNA.'' Proceedings of the National Academy of Sciences (PNAS) 120 (37): e2217330120, 2023.
- Boya Wang*, Molecular information technology with DNA. Trends in Biotechnology, 41 (7): 851-852, 2023.
- Boya Wang, Chris Thachuk, David Soloveichik, Speed and correctness guarantees for programmable enthalpy-neutral DNA reactions. ACS Synthetic Biology, 12 (4): 993–1006, 2023.
- S Kasra Tabatabaei, Boya Wang^, Nagendra Bala Murali Athreya^, Behnam Enghiad, Alvaro Gonzalo Hernandez, Jean-Pierre Leburton, David Soloveichik, Huimin Zhao, Olgica Milenkovic. DNA punch cards for storing data on native DNA sequences via enzymatic nicking. Nature Communications, 11:1742, 2020. (PDF)
- [Best Student Paper Award] Boya Wang, Cameron Chalk, David Soloveichik. SIMD||DNA: Single Instruction, Multiple Data Computation with DNA Strand Displacement Cascades. DNA Computing and Molecular Programming (DNA25) proceedings, Lecture Notes in Computer Science (LNCS) 11648: 219-235, (2019). (PDF)
- Boya Wang, Chris Thachuk, Andrew D. Ellington, Erik Winfree, David Soloveichik, Effective Design Principles for Leakless Strand Displacement Systems. Proceedings of the National Academy of Sciences (PNAS) 115 (52): E12182-E12191, 2018. (PDF, SI)
- Boya Wang, Chris Thachuk, Andrew D. Ellington, David Soloveichik, The design space of strand displacement cascades with toehold-size clamps. DNA Computing and Molecular Programming (DNA23) proceedings, Lecture Notes in Computer Science (LNCS) 10467: 64-81, 2017. (PDF)
- Ruixue Duan^, Boya Wang^, Fan Hong, Tianchi Zhang, Yongmei Jia, Jiayu Huang, Abdul Hakeem, Nannan Liu, Xiaoding Lou, Fan Xia, Real-time monitoring of enzyme-free strand displacement cascades by colorimetric assays. Nanoscale, 7, 5719-5725, 2015.
- Wei Guo, Fan Hong, Nannan Liu, Jiayu Huang, Boya Wang, Ruixue Duan, Xiaoding Lou, Fan Xia, Target‐Specific 3D DNA Gatekeepers for Biomimetic Nanopores. Advanced Materials, 27, 2090–2095, 2015.
- Ruixue Duan, Boya Wang, Tianchi Zhang, Zhenyu Zhang, Shaofang Xu, Zhifei Chen, Xiaoding Lou, Fan Xia, Sensitive and Bidirectional Detection of Urine Telomerase Based on the Four Detection-Color States of Difunctional Gold Nanoparticle Probe. Analytical Chemistry, 86 (19), 9781–9785, 2014.
- Yongmei Jia, Benmei Wei, Ruixue Duan, Ying Zhang, Boya Wang, Abdul Hakeem, Nannan Liu, Xiaowen Ou, Shaofang Xu, Zhifei Chen, Xiaoding Lou, Fan Xia, Imparting biomolecules to a metal-organic framework material by controlled DNA tetrahedron encapsulation. Scientific Reports 4, 5929, 2014.
- Di Kang, Ruixue Duan, Yerpeng Tan, Fan Hong, Boya Wang, Zhifei Chen, Shaofang Xu, Xiaoding Lou, Wei Wei, Bernard Yurke, Fan Xia, Speeding up the self-assembly of a DNA nanodevice using a variety of polar solvents. Nanoscale, 6, 14153-14157, 2014.
- Abdul Hakeem, Ruixue Duan, Fouzia Zahid, Chao Dong, Boya Wang, Fan Hong, Xiaowen Ou, Yongmei Jia, Xiaoding Lou, Fan Xia, Dual stimuli-responsive nano-vehicles for controlled drug delivery: mesoporous silica nanoparticles end-capped with natural chitosan. Chemical Communications, 50, 13268-13271, 2014.
- Yongmei Jia, Ruixue Duan, Fan Hong, Boya Wang, Nannan Liu, Fan Xia, Electrochemical biocomputing: a new class of molecular-electronic logic devices. Soft Matter, 9, 6571-6577, 2013.
Conference
- Oral presentation: Parallel molecular computation on digital data stored in DNA. The 28th International Conference on DNA Computing and Molecular Programming (DNA 28). (University of New Mexico, Albuquerque, 2022)
- Oral presentation: Parallel and in-memory computation with data stored in DNA. The 19th Annual Conference: Foundations of Nanoscience (FNANO2022). (Online, 2022)
- Poster presentation: SIMD||DNA: Experimental validation and high-throughput readout. The 26th International Conference on DNA Computing and Molecular Programming (DNA 26). (University of Oxford, online, 2020). [Poster, 3-min recording]
- Poster presentation: Cells, diffusion and geometry: programming patterns with leader election and signal comparison. The 26th International Conference on DNA Computing and Molecular Programming (DNA 26). (University of Oxford, online, 2020). [Poster]
- Oral presentation: SIMD||DNA: Single Instruction, Multiple Data Computation with DNA Strand Displacement Cascades. The 25th International Conference on DNA Computing and Molecular Programming (DNA 25). (University of Washington, Seattle, 2019). [Slides]
- Poster presentation: Boolean Circuits via Thermodynamic Binding Networks: From Theory to Test Tube. The 25th International Conference on DNA Computing and Molecular Programming (DNA 25). (University of Washington, Seattle, 2019). [Poster]
- Poster presentation: Experimentally characterizing the design space of strand displacement translators with toehold-size clamps. The 24th International Conference on DNA Computing and Molecular Programming (DNA 24). (Shandong Normal University, Jinan, China, 2018). [Poster]
- Oral presentation: The design space of strand displacement cascades with toehold-size clamps. The 23rd International Conference on DNA Computing and Molecular Programming (DNA 23). (University of Texas at Austin, Texas, 2017). [Slides]
- Poster presentation: Characterizing Leakless Strand Displacement Systems. The 22nd International Conference on DNA Computing and Molecular Programming (DNA 22). (Ludwig-Maximilians-Universität (LMU), Munich, Germany, 2016). [Abstract]